Source
: Escherichia coli RY13
Compatible ends
(5'¡¦AATT)
: Acs I, Apo I, Mfe I, Mun I, Sse9 I, Tas I, Tsp509 I, Xap I
Isoschizomers
: Rsr I
Methylation Sensitivity
: Not sensitive to dam and dcm methylation
: Affected by overlapping CpG methylation
Unit definition :
One Unit is defined as the amount of EcoR I required to completely digest 1 §¶ of ¥ë DNA in one hour at 37¡É in 50 §¡ assay mixture.
Typical Reaction Conditions
: Add 5 §¡ of 10X Reaction Buffer 'EcoR I'[final conc.: 90 mM Tris-HCl (pH 7.5 @ 37¡É), 10 mM MgCl2, 50 mM NaCl], 1~2 §¡ of DNA(0.5~1.0 §¶/§¡), 1 §¡ of EcoR I and 42~43 §¡ of sterile water in 50 §¡ reaction mixture. Incubate at 37¡É.
Heat Inactivation
: 65¡É for 20 min.
Activity in BeamsBio¢â Buffer System
Rxn Buffer |
A |
B |
C |
D |
'EcoR I' |
Activity(%) |
10~50 |
50~75 |
50~75 |
50~75 |
75~100 |
|
Activity in a complete PCR Mix : 10~50% Conditions: [10 mM Tris-HCl(pH 8.3 @ 25 ¡É), 50 mM KCl, 1.5 mM MgCl2, 2 pmol of primers, 200 ¥ìM dNTP Mix, 2.5 U Taq DNA polymerase and 1 §¶ of DNA(template or substrate) in 50 §¡ of reaction volume] After 30 amplication cycles, add 5 units of EcoR I. And then incubate at 37¡É for one hour. Relative activity is determined by gel electrophoresis.
Storage Conditions
: 10 mM Tris-HCl(pH 7.5), 100 mM KCl, 0.1 mM EDTA, 1 mM DTT, 0.15% Triton¢â X-100, 100 §¶/§¢ BSA, and 50% glycerol. Store at -20¡É.
No. of Cleavage Sites
¥ë
|
Ad2
|
pUC18
|
¥õX174
|
pBR322
|
M13mp18
|
SV40
|
5
|
5
|
1
|
0
|
1
|
1
|
1
|
Quality control
Overdigestion: The same band pattern as a digestion in one unit of EcoR I for one hour was showing after incubation of 1 §¶ of ¥ë DNA with units of EcoR I for 16 hr in 50 §¡ of reaction mixture at 37¡É as determined by agarose gel electrophoresis.
Ligation-Recut: After a 10-fold digestion for one hour, % of ¥ë DNA fragments were ligated with T4 DNA ligase at 16¡É and % of the ligated fragments could be recut with EcoR I.
|
References
Hedgpeth, J., Goodman, H.M., Boyer, H.W. Proc. Natl. Acad. Sci. U. S. A. 69: 3448-3452 (1972)/ Albertsen, H.M., Le Paslier, D., Abderrahim, H., Dausset, J., Cann, H., Cohen, D. Nucleiv Acids Res. 17: 808 (1989)
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